TLDR
Enter a command. For example: lumen, sync, sslscan, rtv, iverilog.

nf-core

 
The nf-core framework tools, to create, check and develop best-practice guidelines for Nextflow. More information: https://nf-co.re/tools.
 
  • List existing pipelines on nf-core:
     
    nf-core list
     
  • Create a new pipeline skeleton:
     
    nf-core create
     
  • Lint the pipeline code:
     
    nf-core lint {{path/to/directory}}
     
  • Bump software versions in pipeline recipe:
     
    nf-core bump-version {{path/to/directory}} {{new_version}}
     
  • Launch an nf-core pipeline:
     
    nf-core launch {{pipeline_name}}
     
  • Download an nf-core pipeline for offline use:
     
    nf-core download {{pipeline_name}}

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